UniProt Q2MGH6
Endo-alpha-N-acetylgalactosaminidase (Q2MGH6)
Endo-alpha-N-acetylgalactosaminidase (UniProt Q2MGH6), EC 3.2.1.97: 12 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 33 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- Q2MGH6
- Protein
- Endo-alpha-N-acetylgalactosaminidase
- EC
- 3.2.1.97
- Experimental structures
- 12
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 33 · 3 records with a druggable one
Structures
13 records of Q2MGH6 in the MolNFT archive: 12 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5A55 | The native structure of GH101 from Streptococcus pneumoniae TIGR4 | x-ray diffraction | A | CA, MN | 11 (best 0.80) |
| 5A55 | The native structure of GH101 from streptococcus pneumoniae TIGR4 | x-ray diffraction | A | — | — |
| 5A56 | The structure of GH101 from Streptococcus pneumoniae TIGR4 in complex with 1-O-methyl-T-antigen | x-ray diffraction | A | — | — |
| 5A56 | The structure of GH101 from streptococcus pneumoniae TIGR4 in complex with 1-O-methyl-T-antigen | x-ray diffraction | A | — | — |
| 5A57 | The structure of GH101 from Streptococcus pneumoniae TIGR4 in complex with PUGT | x-ray diffraction | A | CA, 5G0, GAL | 12 (best 0.80) |
| 5A57 | The structure of GH101 from streptococcus pneumoniae TIGR4 in complex with pugt | x-ray diffraction | A | — | — |
| 5A58 | The structure of GH101 D764N mutant from Streptococcus pneumoniae TIGR4 in complex with serinyl… | x-ray diffraction | A | — | — |
| 5A58 | The structure of GH101 D764N mutant from streptococcus pneumoniae TIGR4 in complex with serinyl… | x-ray diffraction | A | — | — |
| 5A59 | The structure of GH101 E796Q mutant from Streptococcus pneumoniae TIGR4 in complex with T-antigen | x-ray diffraction | A | — | — |
| 5A59 | The structure of GH101 E796Q mutant from streptococcus pneumoniae TIGR4 in complex with T-antigen | x-ray diffraction | A | — | — |
| 5A5A | The structure of GH101 E796Q mutant from Streptococcus pneumoniae TIGR4 in complex with… | x-ray diffraction | A | A2G, GAL, CA, MN | 10 (best 0.81) |
| 5A5A | The structure of GH101 E796Q mutant from streptococcus pneumoniae TIGR4 in complex with… | x-ray diffraction | A | — | — |
| Q2MGH6 | AlphaFold monomer V2.0 prediction for endo-alpha-N- acetylgalactosaminidase (Q2MGH6) | predicted | A | — | — |
Ligands
- CA · Calcium ion · in 3 records
- GAL · beta-D-galactopyranose · in 2 records
- MN · Manganese (II) ion · in 2 records
- 5G0 · (Z)-[(3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-ylidene]amino] N-phenylcarbamate · in 1 record
- A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose · in 1 record
Experiment against prediction
- 5A5A chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.55 Å
- 5A5A chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.55 Å
- 5A59 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.56 Å
- 5A59 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.56 Å
- 5A56 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.57 Å
- 5A56 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.57 Å
- 5A57 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.60 Å
- 5A57 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.60 Å
- 5A58 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.57 Å
- 5A58 chain A against the predicted model Q2MGH6: TM-score 1.00, RMSD 0.57 Å
Elsewhere
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