Ligand · SER
SER · Serine
SER, Serine (C3 H7 N O3, 105.1 g/mol), in the MolNFT structures on GenesisL1: bound in 17 records (17 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- SER
- Formula
- C3 H7 N O3
- Class
- ligand
- Structures
- 17
- PDB entries
- 17
Binding sites
SER in 17 structures; the first of them:
- 4XTP · Crystal structure of a recombinant Vatairea macrocarpa seed lectin complexed with Tn… · SER A311 · binds PHE127
- 5AVE · The ligand binding domain of Mlp37 with serine · SER A501 · binds LEU123, TRP141, TRP147, ARG152, TRP154, TYR170, ALA171, ASP172 and 6 more
- 5KDX · IMPa metallopeptidase in complex with T-antigen · SER A1021 · binds GLY675, HIS696, GLU697, TYR776
- 5NG7 · Novel epoxide hydrolases belonging to the alpha/beta hydrolases superfamily in… · SER B303 · binds ASP101, TRP102, ILE105, PRO127, TYR132, SER146, TYR148, VAL149 and 3 more
- 5OHZ · Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH)… · SER A505 · binds TYR36, TRP40, HIS78, TYR88, TRP177, ASP182, ARG216, TYR222 and 1 more
- 5Y1E · monomeric L-threonine 3-dehydrogenase from metagenome database (L-Ser and NAD+ bound form) · SER A402 · binds LEU73, SER74, SER111, TYR136, GLY165, GLY176, THR177, THR178 and 2 more
- 6HYY · Human phosphoserine phosphatase with serine and phosphate · SER A303 · binds ASP20, VAL21, ASP22, PHE58, ILE108, SER109, GLY110, GLY111 and 2 more
- 6IOU · The ligand binding domain of Mlp24 with serine · SER A501 · binds TRP114, TYR120, ARG125, TRP127, TYR143, VAL144, ASP145, ILE146 and 5 more
- 6MO3 · Citrobacter freundii tyrosine phenol-lyase complexed with 4-hydroxypyridine and… · SER B501 · binds TYR71, THR49, SER51, ARG100, PHE123, ASN185, ARG217, LLP257 and 1 more
- 6PY5 · Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA… · SER A301 · binds TYR101, PHE109, ILE111, MET117, PHE121, ARG126, TRP128, TYR144 and 7 more
- 6ULD · Crystal structure of serine hydroxymethyltransferase from Mycobacterium tuberculosis with… · SER A503 · binds TYR73, GLU75, TYR83, SER53, HIS144, SER194, HIS222, LYS248 and 1 more
- 6VFD · Tryptophan synthase mutant Q114A in complex with cesium ion at the metal coordination… · SER A303 · binds PRO78, PHE82, ASN109, ALA113, PHE114, ARG117
- 7X6F · Outer membrane lipoprotein QseG of Escherichia coli O157:H7 · SER B301 · binds GLU202, ARG203, GLN204, LEU205
- 8IZB · Lysophosphatidylserine receptor GPR174-Gs complex · SER R502 · binds TYR22, TYR26, ARG75, TYR79, PHE95, LYS98, TYR99, ARG156 and 3 more
- 8SUI · Joint X-ray/neutron structure of Thermus thermophilus serine hydroxymethyltransferase… · SER B1502 · binds GLU1053, TYR1060, TYR1061
- 8U99 · Crystal Structure of Cystathionine beta lyase from Klebsiella aerogenes (PLP-Serine… · SER A402 · binds TYR111, LYS210, TYR338, SER339, TRP340, ARG372
- 8WRB · Lysophosphatidylserine receptor GPR34-Gi complex · SER R602 · binds ARG110, TYR135, PHE205, HIS206, ARG208, TYR282, ARG286, TYR289 and 3 more
Residues it binds most
TYR 20, ARG 16, TRP 12, SER 12, ASP 11, PHE 11, HIS 8, ILE 5, GLU 6, GLY 5 (residue and the binding sites it lines).
Found with
- EDO · 1,2-ethanediol
- CA · Calcium ion
- CL · Chloride ion
- CLR · Cholesterol
- PLP · Pyridoxal-5'-phosphate
- UBL · [(2R)-2-oxidanyl-3-phosphonooxy-propyl] (Z)-octadec-9-enoate
- MG · Magnesium ion
- A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose
- PO4 · Phosphate ion
- SO4 · Sulfate ion
- MPD · (4S)-2-methyl-2,4-pentanediol
- 0JO · 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid
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