UniProt P02452
Collagen alpha-1(I) chain,Collagen alpha-2(IX) chain (P02452)
Collagen alpha-1(I) chain,Collagen alpha-2(IX) chain (UniProt P02452): 19 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 22 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- P02452
- Protein
- Collagen alpha-1(I) chain,Collagen alpha-2(IX) chain
- Experimental structures
- 19
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 22 · 1 record with a druggable one
Structures
20 records of P02452 in the MolNFT archive: 19 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1Q7D | Structure of the integrin alpha2beta1 binding collagen peptide | x-ray diffraction | A, B, C | — | — |
| 1Q7D | Structure of the integrin ALPHA2BETA1 binding collagen peptide | x-ray diffraction | A, B, C | — | — |
| 2LLP | Solution structure of a THP type 1 alpha 1 collagen fragment (772-786) | solution nmr | A, B, C | — | — |
| 2LLP | Solution structure of a thp type 1 alpha 1 collagen fragment (772-786) | solution nmr | A, B, C | — | — |
| 3GXE | Complex of a Low Affinity Collagen Site with the Fibronectin 8-9FnI Domain Pair | x-ray diffraction | F, E | — | — |
| 3GXE | Complex of a low affinity collagen site with the fibronectin 8-9FNI domain pair | x-ray diffraction | F, E | — | — |
| 5CTD | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | A, C | — | — |
| 5CTD | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | A, C | — | — |
| 5CTI | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | A, C | — | — |
| 5CTI | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | A, C | — | — |
| 5CVA | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | B, C, E, F | — | 1 (best 0.34) |
| 5CVA | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | B, C, E, F | — | — |
| 5CVB | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | A, B, C, D, E, F | — | 1 (best 0.36) |
| 5CVB | Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment… | x-ray diffraction | A, B, C, D, E, F | — | — |
| 5K31 | Crystal structure of Human fibrillar procollagen type I C-propeptide Homo-trimer | x-ray diffraction | A, B, C, D, E, F | CA, CL | — |
| 5K31 | Crystal structure of human fibrillar procollagen type I C-propeptide homo-trimer | x-ray diffraction | A, B, C, D, E, F | CA, CL | — |
| 7E7B | Cryo-EM structure of the SARS-cov-2 furin site mutant S-trimer from a subunit vaccine candidate | electron microscopy | A, B, C | NAG, ELA, VCG | — |
| 7E7D | Cryo-EM structure of the SARS-CoV-2 wild-type S-Trimer from a subunit vaccine candidate | electron microscopy | A, B, C | NAG, ELA | 20 (best 0.86) |
| 7E7D | Cryo-EM structure of the SARS-cov-2 wild-type S-trimer from a subunit vaccine candidate | electron microscopy | A, B, C | NAG, ELA | — |
| P02452 | AlphaFold monomer V2.0 prediction for collagen alpha-1(I) chain (P02452) | predicted | A | — | — |
Ligands
- ELA · 9-octadecenoic acid · in 3 records
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · in 3 records
- CA · Calcium ion · in 2 records
- CL · Chloride ion · in 2 records
- VCG · 2-hydroxyethyl 2-deoxy-3,5-bis-O-(2-hydroxyethyl)-6-O-(2-{[(9E)-octadec-9-enoyl]oxy}ethyl)-alpha-L-xylo-hexofuranoside · in 1 record
Experiment against prediction
- 5K31 chain C against the predicted model P02452: TM-score 0.99, RMSD 0.51 Å
- 5K31 chain C against the predicted model P02452: TM-score 0.99, RMSD 0.51 Å
- 5K31 chain A against the predicted model P02452: TM-score 0.99, RMSD 0.81 Å
- 5K31 chain A against the predicted model P02452: TM-score 0.99, RMSD 0.81 Å
- 5K31 chain F against the predicted model P02452: TM-score 0.99, RMSD 0.69 Å
- 5K31 chain F against the predicted model P02452: TM-score 0.99, RMSD 0.69 Å
- 5K31 chain B against the predicted model P02452: TM-score 0.99, RMSD 0.61 Å
- 5K31 chain B against the predicted model P02452: TM-score 0.99, RMSD 0.61 Å
- 5K31 chain E against the predicted model P02452: TM-score 0.99, RMSD 0.68 Å
- 5K31 chain E against the predicted model P02452: TM-score 0.99, RMSD 0.68 Å
Elsewhere
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