UniProt C1K5M2
Dimethylallylcistransferase CPT1, chloroplastic,Dehydrodolichyl diphosphate synthase 2 (C1K5M2)
Dimethylallylcistransferase CPT1, chloroplastic,Dehydrodolichyl diphosphate synthase 2 (UniProt C1K5M2), EC 2.5.1.28: 7 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 36 pockets. Binding sites…
- UniProt
- C1K5M2
- Protein
- Dimethylallylcistransferase CPT1, chloroplastic,Dehydrodolichyl diphosphate…
- EC
- 2.5.1.28
- Experimental structures
- 7
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 36 · 6 records with a druggable one
Structures
8 records of C1K5M2 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7VPC | Neryl diphosphate synthase from Solanum lycopersicum | x-ray diffraction | A, B | MLT | 4 (best 0.74) |
| 7VPC | Neryl diphosphate synthase from solanum lycopersicum | x-ray diffraction | A, B | MLT | — |
| 8KGA | SlNDPS1-AtcPT4 Chimera | x-ray diffraction | A, B | — | 6 (best 0.72) |
| 8KGB | SlNDPS1-AtcPT4 Chimera complexed with GSPP, Mg2+, and IPP | x-ray diffraction | A, B, C, D | GST, IPE, MG | 10 (best 0.82) |
| 8X35 | Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion… | x-ray diffraction | A, B | MG, IPE, DST, DPO | 5 (best 0.80) |
| 8X36 | Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion… | x-ray diffraction | A, B | DST, IPE, MG | 6 (best 0.80) |
| 8X37 | Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP | x-ray diffraction | A, B | DST, MG | 5 (best 0.81) |
| C1K5M2 | AlphaFold monomer V2.0 prediction for dimethylallylcistransferase CPT1, chloroplastic (C1K5M2) | predicted | A | — | — |
Ligands
Experiment against prediction
- 8X35 chain A against the predicted model C1K5M2: TM-score 0.95, RMSD 1.21 Å
- 8X36 chain A against the predicted model C1K5M2: TM-score 0.94, RMSD 1.31 Å
- 8KGA chain A against the predicted model Q56Y11: TM-score 0.94, RMSD 1.42 Å
- 8X37 chain A against the predicted model C1K5M2: TM-score 0.94, RMSD 1.30 Å
- 8X35 chain B against the predicted model C1K5M2: TM-score 0.94, RMSD 1.00 Å
- 8X37 chain B against the predicted model C1K5M2: TM-score 0.93, RMSD 0.98 Å
- 8X36 chain B against the predicted model C1K5M2: TM-score 0.93, RMSD 1.01 Å
- 7VPC chain B against the predicted model C1K5M2: TM-score 0.93, RMSD 0.87 Å
- 7VPC chain B against the predicted model C1K5M2: TM-score 0.93, RMSD 0.87 Å
- 8KGB chain D against the predicted model Q56Y11: TM-score 0.93, RMSD 1.68 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.