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Ligand · Y5L

Y5L · 4-(2-chloro-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl)-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one

Y5L, 4-(2-chloro-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl)-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one (C16 H15 Cl N4 O2, 330.8 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
Y5L
Formula
C16 H15 Cl N4 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

Y5L in 2 structures; the first of them:

  • 6X1E · Tubulin-RB3_SLD-TTL in complex with compound 5l · Y5L B505 · binds THR179, VAL236, CYS239, LEU240, LEU246, ALA248, LYS252, LEU253 and 10 more
  • 6X1E · Tubulin-RB3_SLD-ttl in complex with compound 5L · Y5L B505 · binds THR179, VAL236, CYS239, LEU240, LEU246, ALA248, LYS252, LEU253 and 10 more

Residues it binds most

ALA 4, LEU 4, VAL 4, ASN 4, LYS 4, THR 4, CYS 4, ILE 4, MET 4 (residue and the binding sites it lines).

Found with

  • ACP · Phosphomethylphosphonic acid adenylate ester
  • GDP · Guanosine-5'-diphosphate
  • GTP · Guanosine-5'-triphosphate
  • CA · Calcium ion
  • MG · Magnesium ion
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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