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Ligand · WUO

WUO · acyl-phosphatidyl-myo-inositol dimannoside (AcPIM2)

WUO, acyl-phosphatidyl-myo-inositol dimannoside (AcPIM2) (C72 H135 O24 P, 1415.8 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
WUO
Formula
C72 H135 O24 P
Class
ligand
Structures
2
PDB entries
2

Binding sites

WUO in 2 structures; the first of them:

  • 9FTZ · CIII2/CIV respiratory supercomplex from Mycobacterium smegmatis with lansoprazole sulfide · WUO O302 · binds LYS197, ASP209, GLY211, ALA253, PRO256, SER257, GLY260, TYR261 and 19 more
  • 9FU0 · CIII2/CIV respiratory chain supercomplex from Mycobacterium smegmatis · WUO O301 · binds LYS197, ASP209, GLY211, ALA253, PRO256, SER257, GLY260, TYR261 and 18 more

Residues it binds most

LEU 4, GLY 4, ALA 4, PHE 4, VAL 3, ILE 4, PRO 2, TRP 4, GLN 2, ASP 2 (residue and the binding sites it lines).

Found with

  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine
  • 7PH · (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate
  • 9XX · (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate
  • 9YF · (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1r,2r,3r,4r, 5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate
  • CDL · Cardiolipin
  • FES · Fe2/s2 (inorganic) cluster
  • HEA · Heme-A
  • HEC · Heme C
  • HEM · Protoporphyrin IX containing Fe
  • IZL · [(2~{R})-3-[[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-[[(2~{S},3~{S}, 4~{S},5~{S},6~{R})-6-[[(2~{S},3~{S},4~{S},5~{S}, 6~{R})-6-(hydroxymethyl)-3-[(2~{R},3~{S},4~{S},5~{S}, 6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,5-bis(oxidanyl)oxan-2-yl]oxymethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3,4,5-tris(oxidanyl)-6-[(2~{R},3~{S},4~{S},5~{S},6~{R})-3,4,5-tris(oxidanyl)-6-(undecanoyloxymethyl)oxan-2-yl]oxy-cyclohe
  • MQ9 · Menaquinone-9
  • PLM · Palmitic acid

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