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Ligand · O9B

O9B · (2~{R})-1-methylpiperidine-2-carboxylic acid

O9B, (2~{R})-1-methylpiperidine-2-carboxylic acid (C7 H13 N O2, 143.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
O9B
Formula
C7 H13 N O2
Class
ligand
Structures
3
PDB entries
2

Binding sites

O9B in 3 structures; the first of them:

  • 6Y4N · Structure of Tubulin Tyrosine Ligase in Complex with Tb116 · O9B B1004 · binds PRO173, LYS174, VAL175, SER176, ASP177, ASN329, ILE332, LYS336 and 2 more
  • 6Y4M · Structure of tubulin tyrosine ligase in complex with TB111 · O9B B1004 · binds PRO173, LYS174, VAL175, ASP177, ASN329, ILE332, PHE351, VAL353 and 1 more
  • 6Y4N · Structure of tubulin tyrosine ligase in complex with TB116 · O9B B1004 · binds PRO173, LYS174, VAL175, ASP177, ASN329, ILE332, PHE351, VAL353 and 1 more

Residues it binds most

VAL 3, LYS 3, ASN 3, ASP 3, ILE 3, PHE 3, PRO 3, SER 1 (residue and the binding sites it lines).

Found with

  • ACP · Phosphomethylphosphonic acid adenylate ester
  • GDP · Guanosine-5'-diphosphate
  • GTP · Guanosine-5'-triphosphate
  • CA · Calcium ion
  • MG · Magnesium ion
  • MES · 2-(N-morpholino)-ethanesulfonic acid
  • PGE · Triethylene glycol
  • O9K · [(1~{R},3~{R})-1-(4-methanoyl-1,3-thiazol-2-yl)-4-methyl-3-(methylamino)pentyl] ethanoate
  • O9N · methyl (2~{S},4~{S})-2,4-bis(azanyl)-5-phenyl-pentanoate
  • P6S · benzyl hydrogen carbonate
  • PEG · Di(hydroxyethyl)ether
  • O9H · [(1~{R},3~{R})-1-acetyloxy-1-[4-methanoyl-5-(2-phenylmethoxyethyl)-2,3-dihydro-1,3-thiazol-2-yl]-4-methyl-pentan-3-yl]-methyl-azanium

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