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Ligand · VAL

VAL · Valine

VAL, Valine (C5 H11 N O2, 117.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (8 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
VAL
Formula
C5 H11 N O2
Class
ligand
Structures
8
PDB entries
8

Binding sites

VAL in 8 structures; the first of them:

  • 6X9N · Pseudomonas aeruginosa MurC with AZ5595 · VAL H501 · binds THR127, SER131, PHE317, GLY319
  • 6Y4N · Structure of Tubulin Tyrosine Ligase in Complex with Tb116 · VAL C1005 · binds PRO220, LEU248, PRO325, VAL328, ASN329, VAL353, ILE355
  • 6YU5 · Crystal structure of MhsT in complex with L-valine · VAL A501 · binds SER25, ALA26, GLY28, LEU29, GLY30, ASN31, TYR108, PHE230 and 7 more
  • 7QI6 · Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution · VAL B101 · binds A76, PHE165, GLY166, GLN168, PRO218, MET221
  • 7XFT · MucP PDZ2 domain · VAL A401 · binds TRP257, VAL261, VAL264, ARG265, GLY300, TYR301, MET302, GLY303 and 1 more
  • 8K1Y · Crystal structure of human serum albumin and ruthenium Val complex adduct · VAL A602 · binds ILE142, HIS146, PHE149, LEU154, PHE157, TYR161, ARG186, GLY189 and 1 more
  • 8OIR · 55S human mitochondrial ribosome with mtRF1 and P-site tRNA · VAL B9101 · binds A72, PHE165, GLY166, GLN168, PHE217, PRO218, MET221
  • 8OIT · 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA · VAL B9101 · binds A72, PHE165, GLY166, GLN168, PHE217, PRO218, MET221

Residues it binds most

GLY 8, PHE 7, SER 3, LEU 4, MET 6, PRO 4, TYR 4, VAL 2, A 3, ALA 3 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • GDP · Guanosine-5'-diphosphate
  • K · Potassium ion
  • ZN · Zinc ion
  • ATP · Adenosine-5'-triphosphate
  • FS2 · Fe-S-O hybrid cluster
  • MET · Methionine
  • NA · Sodium ion
  • CL · Chloride ion
  • DMS · Dimethyl sulfoxide
  • ACP · Phosphomethylphosphonic acid adenylate ester
  • BNG · nonyl beta-D-glucopyranoside

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