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Ligand · MRP

MRP · 3-O-methyl-alpha-L-rhamnopyranose

MRP, 3-O-methyl-alpha-L-rhamnopyranose (C7 H14 O5, 178.2 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
MRP
Formula
C7 H14 O5
Class
sugar
Structures
5
PDB entries
3

Binding sites

MRP in 5 structures; the first of them:

  • 2L65 · HADDOCK calculated model of the complex of the resistance protein CalC and… · MRP A627 · binds ASN33, PHE65, GLY132, MET133, LYS135, GLY136, TRP137, ILE140
  • 2PIK · Calicheamicin GAMMA1I-DNA complex, NMR, 6 structures · MRP A34 · binds DG8, DG9, DG19, DA20
  • 8H4V · Mincle CRD complex with PGL trisaccharide · MRP E1
  • 2L65 · Haddock calculated model of the complex of the resistance protein calc and… · MRP A627 · binds ASN33, PHE65, GLY132, MET133, LYS135, GLY136, TRP137, ILE140
  • 2PIK · Calicheamicin GAMMA1I-DNA complex, NMR, 6 structures · MRP A34 · binds DG8, DG9, DG19, DA20

Residues it binds most

DG 2, GLY 2, ASN 2, DA 2, ILE 2, LYS 2, MET 2, PHE 2, TRP 2 (residue and the binding sites it lines).

Found with

  • DAG · 4-amino-4,6-dideoxy-beta-D-glucopyranose
  • HIB · 4-hydroxy-5-iodo-2,3-dimethoxy-6-methylbenzoic acid
  • MTC · [1,8-dihydroxy-11-oxo-13-(2-methyltrithio-ethylidene)-bicyclo[7.3.1]trideca-4,9-diene-2,6-diyn-10-yl]-carbamic acid methyl ester
  • DSR · 2,6-dideoxy-4-thio-beta-D-allopyranose
  • EMP · 2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose
  • 7CV · 6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose
  • CA · Calcium ion
  • L6N · (2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol

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