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Ligand · DSR

DSR · 2,6-dideoxy-4-thio-beta-D-allopyranose

DSR, 2,6-dideoxy-4-thio-beta-D-allopyranose (C6 H12 O3 S, 164.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
DSR
Formula
C6 H12 O3 S
Class
sugar
Structures
4
PDB entries
2

Binding sites

DSR in 4 structures; the first of them:

  • 2L65 · HADDOCK calculated model of the complex of the resistance protein CalC and… · DSR A625 · binds ASN84, GLY85, PHE86
  • 2PIK · Calicheamicin GAMMA1I-DNA complex, NMR, 6 structures · DSR A32 · binds DC5, DC6, DT7, DG19, DA20, DG21
  • 2L65 · Haddock calculated model of the complex of the resistance protein calc and… · DSR A625 · binds ASN84, GLY85, PHE86
  • 2PIK · Calicheamicin GAMMA1I-DNA complex, NMR, 6 structures · DSR A32 · binds DC5, DC6, DT7, DG19, DA20, DG21

Residues it binds most

DC 2, DG 2, ASN 2, DA 2, DT 2, GLY 2, PHE 2 (residue and the binding sites it lines).

Found with

  • DAG · 4-amino-4,6-dideoxy-beta-D-glucopyranose
  • HIB · 4-hydroxy-5-iodo-2,3-dimethoxy-6-methylbenzoic acid
  • MTC · [1,8-dihydroxy-11-oxo-13-(2-methyltrithio-ethylidene)-bicyclo[7.3.1]trideca-4,9-diene-2,6-diyn-10-yl]-carbamic acid methyl ester
  • EMP · 2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose
  • MRP · 3-O-methyl-alpha-L-rhamnopyranose

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