Ligand · II0
II0 · (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol
II0, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol (C40 H52 O2, 564.8…
- Component
- II0
- Formula
- C40 H52 O2
- Class
- ligand
- Structures
- 5
- PDB entries
- 5
Binding sites
II0 in 5 structures; the first of them:
- 7Y7B · Cryo-EM structure of cryptophyte photosystem I · II0 1614 · binds MET100, LEU101, ALA103, ALA104, ILE107, PHE174, ASP175, PRO176 and 11 more
Residues it binds most
LEU 235, PHE 195, ILE 186, ALA 132, MET 129, PRO 144, VAL 131, GLN 147, GLY 122, HIS 108 (residue and the binding sites it lines).
Found with
- CLA · Chlorophyll A
- DGD · Digalactosyl diacyl glycerol (dgdg)
- IHT · (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol
- KC2 · Chlorophyll c2
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride
- SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol
- 8CT · (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene
- BCT · Bicarbonate ion
- HEM · Protoporphyrin IX containing Fe
- II3 · (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol
- PHO · Pheophytin A
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