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Ligand · LMU

LMU · Dodecyl-alpha-D-maltoside

LMU, Dodecyl-alpha-D-maltoside (C24 H46 O11, 510.6 g/mol), in the MolNFT structures on GenesisL1: bound in 27 records (23 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
LMU
Formula
C24 H46 O11
Class
ligand
Structures
27
PDB entries
23

Binding sites

LMU in 27 structures; the first of them:

  • 5M24 · RARg mutant-S371E · LMU A502 · binds LYS236, ILE238, ILE239, LYS240, VAL242, LEU263, LYS264, CYS267 and 3 more
  • 6IJO · Photosystem I of Chlamydomonas reinhardtii · LMU A857 · binds LEU244, LEU245, ASN246, ARG247, VAL236, MET237, THR238, GLY239
  • 6J3Y · Structure of C2S2-type PSII-FCPII supercomplex from diatom · LMU 12302 · binds GLU53, ALA56, ARG59
  • 6J3Z · Structure of C2S1M1-type PSII-FCPII supercomplex from diatom · LMU B625
  • 6J40 · Structure of C2S2M2-type PSII-FCPII supercomplex from diatom · LMU 12302 · binds GLU53, ALA56, ARG59
  • 7BLZ · Red alga C.merolae Photosystem I · LMU 3202 · binds LEU24, GLY130, PHE131, ASP132, PRO133
  • 7DZ8 · State transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of… · LMU A857 · binds LEU244, LEU245, ARG247, ALA235, VAL236, MET237, THR238, GLY239
  • 7VD5 · Structure of C2S2M2-type PSII-FCPII supercomplex from diatom · LMU 19315 · binds GLY198, PHE200, SER201, PHE203, ALA115, ASN150, LEU152, GLU153 and 8 more
  • 7VD6 · Structure of S1M1-type FCPII complex from diatom · LMU 19315 · binds GLY199, SER202, PHE204, ALA115, ASN150, LEU152, GLU153, PHE155 and 7 more
  • 7XQP · PSI-LHCI-LHCII-Lhcb9 supercomplex of Physcomitrella patens · LMU A853 · binds ILE83, TRP116
  • 7Y7B · Cryo-EM structure of cryptophyte photosystem I · LMU 4618 · binds GLY126, GLY127, GLN130, TYR211, PRO212, ASN171
  • 7Y8A · Cryo-EM structure of cryptophyte photosystem I · LMU 4618 · binds GLY126, GLN130, TYR211, PRO212, ASN171
  • 7ZQ9 · Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded) · LMU A857 · binds LEU244, LEU245, ASN246, ARG247, ALA235, VAL236, MET237, THR238 and 1 more

Residues it binds most

LEU 71, PHE 57, GLY 46, TRP 40, ILE 34, ALA 33, ARG 38, TYR 38, THR 33, GLN 25 (residue and the binding sites it lines).

Found with

  • CLA · Chlorophyll A
  • LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole
  • DGD · Digalactosyl diacyl glycerol (dgdg)
  • LMG · 1,2-distearoyl-monogalactosyl-diglyceride
  • BCR · Beta-carotene
  • PQN · Phylloquinone
  • SF4 · Iron/sulfur cluster
  • LUT · (3R,3'R,6S)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol
  • XAT · (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-diepoxy-5,6,5',6'-tetrahydro-beta,beta-carotene-3,3'-diol
  • NEX · (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R, 6R)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol
  • SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol
  • CHL · Chlorophyll B

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