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Ligand · LUT

LUT · (3R,3'R,6S)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol

LUT, (3R,3'R,6S)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (C40 H56 O2, 568.9 g/mol), in the MolNFT structures on GenesisL1: bound in 71 records (55 PDB entries). Every binding site with its residues within 4.5 Å, the residues…

Component
LUT
Formula
C40 H56 O2
Class
ligand
Structures
71
PDB entries
55

Binding sites

LUT in 71 structures; the first of them:

  • 5L8R · The structure of plant photosystem I super-complex at 2.6 angstrom resolution. · LUT 1501 · binds MET88, VAL91, PHE165, ASP166, PRO167, LEU168, GLY169, TYR170 and 8 more
  • 5XNM · Structure of unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum · LUT 11620 · binds MET73, LEU74, ALA76, LEU77, VAL80, PHE161, ASP162, PRO163 and 11 more
  • 5XNO · Structure of M-LHCII and CP24 complexes in the unstacked C2S2M2-type PSII-LHCII… · LUT 11620 · binds MET73, LEU74, ALA76, LEU77, VAL80, PHE161, ASP162, PRO163 and 11 more

Residues it binds most

LEU 885, ALA 956, PHE 897, PRO 739, MET 897, TRP 461, ASN 564, GLY 502, ASP 789, GLN 488 (residue and the binding sites it lines).

Found with

  • CLA · Chlorophyll A
  • LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole
  • CHL · Chlorophyll B
  • BCR · Beta-carotene
  • XAT · (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-diepoxy-5,6,5',6'-tetrahydro-beta,beta-carotene-3,3'-diol
  • DGD · Digalactosyl diacyl glycerol (dgdg)
  • LMG · 1,2-distearoyl-monogalactosyl-diglyceride
  • PQN · Phylloquinone
  • SF4 · Iron/sulfur cluster
  • CL0 · Chlorophyll A isomer
  • NEX · (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R, 6R)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol
  • LMT · Dodecyl-beta-D-maltoside

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