GL1X · GenesisL1 explorer

Ligand · 2WD

2WD · (1R)-1-{[(2S)-3-hydroxy-2-{[(1R)-1-hydroxypentyl]oxy}propyl]oxy}hexan-1-ol

2WD, (1R)-1-{[(2S)-3-hydroxy-2-{[(1R)-1-hydroxypentyl]oxy}propyl]oxy}hexan-1-ol (C14 H30 O5, 278.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
2WD
Formula
C14 H30 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

2WD in 2 structures; the first of them:

  • 4OGQ · Internal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex · 2WD D206 · binds LEU32, LEU35, TYR36, VAL39, ASN40, ILE43
  • 4OGQ · Internal lipid architecture of the hetero-oligomeric cytochrome B6F complex · 2WD D206 · binds LEU32, LEU35, TYR36, VAL39, ASN40, ILE43

Residues it binds most

LEU 2, ASN 2, ILE 2, TYR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • 1O2 · (2S)-3-(alpha-D-galactopyranosyloxy)-2-(hexadecanoyloxy)propyl (9Z)-octadec-9-enoate
  • 2WA · (1S,8E)-1-{[(2S)-1-hydroxy-3-{[(1S)-1-hydroxypentadecyl]oxy}propan-2-yl]oxy}heptadec-8-en-1-ol
  • 2WM · (1S,8E)-1-{[(2S)-3-hydroxy-2-{[(1S)-1-hydroxyoctadecyl]oxy}propyl]oxy}octadec-8-en-1-ol
  • 3WM · (1S,8E,1'R,8'Z)-1,1'-{[(2S)-3-hydroxypropane-1,2-diyl]bis(oxy)}bisoctadec-8-en-1-ol
  • 7PH · (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate
  • 8K6 · Octadecane
  • BCR · Beta-carotene
  • CLA · Chlorophyll A
  • FES · Fe2/s2 (inorganic) cluster
  • HEC · Heme C
  • MYS · Pentadecane
  • OPC · (7R,17E)-4-hydroxy-N,N,N,7-tetramethyl-7-[(8E)-octadec-8-enoyloxy]-10-oxo-3,5,9-trioxa-4-phosphaheptacos-17-en-1-aminium 4-oxide

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