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Ligand · OPC

OPC · (7R,17E)-4-hydroxy-N,N,N,7-tetramethyl-7-[(8E)-octadec-8-enoyloxy]-10-oxo-3,5,9-trioxa-4-phosphaheptacos-17-en-1-aminium 4-oxide

OPC, (7R,17E)-4-hydroxy-N,N,N,7-tetramethyl-7-[(8E)-octadec-8-enoyloxy]-10-oxo-3,5,9-trioxa-4-phosphaheptacos-17-en-1-aminium 4-oxide (C45 H87 N O8 P +1, 801.1 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (10 PDB…

Component
OPC
Formula
C45 H87 N O8 P +1
Class
ligand
Structures
10
PDB entries
10

Binding sites

OPC in 10 structures; the first of them:

  • 1VF5 · Crystal Structure of Cytochrome b6f Complex from M.laminosus · OPC B307 · binds SER23, LYS24, ASN34, ASP35, TYR38, LYS276, GLN17
  • 2E74 · Crystal Structure of the Cytochrome b6f Complex from M.laminosus · OPC B202 · binds TYR105, ILE87, LEU100, SER103, VAL104, GLY107, LEU108, VAL111 and 11 more
  • 2E75 · Crystal Structure of the Cytochrome b6f Complex with 2-nonyl-4-hydroxyquinoline N-oxide… · OPC A1002 · binds MET92, MET96, THR47, CYS50, PRO37, GLN38, GLY4, ALA5 and 17 more
  • 2E76 · Crystal Structure of the Cytochrome b6f Complex with tridecyl-stigmatellin (TDS) from… · OPC A1002 · binds MET92, MET96, CYS50, ILE51, LEU54, PRO37, GLN38, MET1 and 20 more
  • 2ZT9 · Crystal Structure of the Cytochrome b6f Complex from Nostoc sp. PCC 7120 · OPC B202 · binds TYR105, ILE87, ALA100, SER103, VAL104, GLY107, LEU108, VAL111 and 12 more
  • 4H0L · Cytochrome b6f Complex Crystal Structure from Mastigocladus laminosus with n-Side… · OPC A305 · binds MET92, MET96, THR47, CYS50, ILE51, LEU54, VAL36, PRO37 and 22 more
  • 4H13 · Crystal Structure of the Cytochrome b6f Complex from Mastigocladus laminosus with TDS · OPC A305 · binds CYS43, MET92, MET96, CYS50, ILE51, LEU54, PRO37, GLN38 and 22 more
  • 4H44 · 2.70 A Cytochrome b6f Complex Structure From Nostoc PCC 7120 · OPC B202 · binds TYR105, ILE87, ALA100, SER103, VAL104, GLY107, LEU108, VAL111 and 11 more
  • 4OGQ · Internal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex · OPC B205 · binds TYR105, ILE87, ALA100, SER103, VAL104, GLY107, LEU108, VAL111 and 12 more
  • 4PV1 · Cytochrome B6F structure from M. laminosus with the qui analog inhibitor stigmatellin · OPC B205 · binds TYR105, ILE87, LEU100, SER103, VAL104, GLY107, LEU108, VAL111 and 10 more

Residues it binds most

LEU 20, VAL 20, ILE 18, ALA 20, PHE 15, MET 11, TYR 19, SER 18, GLU 17, GLY 15 (residue and the binding sites it lines).

Found with

  • BCR · Beta-carotene
  • CLA · Chlorophyll A
  • FES · Fe2/s2 (inorganic) cluster
  • SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol
  • UMQ · Undecyl-maltoside
  • HEM · Protoporphyrin IX containing Fe
  • CD · Cadmium ion
  • 7PH · (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate
  • 8K6 · Octadecane
  • MYS · Pentadecane
  • TDS · 8-hydroxy-5,7-dimethoxy-3-methyl-2-tridecyl-4H-chromen-4-one
  • OCT · N-octane

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