Ligand · TDS
TDS · 8-hydroxy-5,7-dimethoxy-3-methyl-2-tridecyl-4H-chromen-4-one
TDS, 8-hydroxy-5,7-dimethoxy-3-methyl-2-tridecyl-4H-chromen-4-one (C25 H38 O5, 418.6 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…
- Component
- TDS
- Formula
- C25 H38 O5
- Class
- ligand
- Structures
- 3
- PDB entries
- 3
Binding sites
TDS in 3 structures; the first of them:
- 1Q90 · Structure of the cytochrome b6f (plastohydroqui : plastocyanin oxidoreductase) from… · TDS D920 · binds VAL143, ALA147, ILE150, VAL151, VAL154, PRO155, ILE165, LEU169 and 11 more
- 1VF5 · Crystal Structure of Cytochrome b6f Complex from M.laminosus · TDS A304 · binds SER130, VAL133, THR134, VAL151, VAL154, LEU169, ARG182, TYR183 and 10 more
- 2E76 · Crystal Structure of the Cytochrome b6f Complex with tridecyl-stigmatellin (TDS) from… · TDS B1201 · binds TYR136, VAL143, ALA147, ILE150, VAL151, VAL154, PRO155, ILE165 and 7 more
Residues it binds most
VAL 5, LEU 5, PHE 5, PRO 5, ILE 2, ALA 5, ARG 3, MET 3, TYR 3, SER 2 (residue and the binding sites it lines).
Found with
- BCR · Beta-carotene
- CLA · Chlorophyll A
- FES · Fe2/s2 (inorganic) cluster
- HEM · Protoporphyrin IX containing Fe
- OPC · (7R,17E)-4-hydroxy-N,N,N,7-tetramethyl-7-[(8E)-octadec-8-enoyloxy]-10-oxo-3,5,9-trioxa-4-phosphaheptacos-17-en-1-aminium 4-oxide
- SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol
- HEC · Heme C
- LFA · Eicosane
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride
- PL9 · 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2, 6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone
- UMQ · Undecyl-maltoside
- CD · Cadmium ion
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