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Ligand · 147

147 · 4-nitrophenyl beta-D-galactopyranoside

147, 4-nitrophenyl beta-D-galactopyranoside (C12 H15 N O8, 301.2 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
147
Formula
C12 H15 N O8
Class
sugar
Structures
12
PDB entries
6

Binding sites

147 in 12 structures; the first of them:

  • 1JYW · E. COLI (lacZ) BETA-GALACTOSIDASE (E537Q) IN COMPLEX WITH PNPG · 147 A2001 · binds ASN102, VAL103, ASP201, HIS418, GLU461, MET502, TYR503, GLN537 and 6 more
  • 1KRV · Galactoside Acetyltransferase in Complex with CoA and PNP-beta-Gal · 147 A206 · binds ASP17, ARG26, SER71, TYR72, VAL91, ASP93, THR113, HIS115 and 7 more
  • 2WGZ · Crystal structure of alpha-1,3 galactosyltransferase (alpha3GT) in a complex with… · 147 A1204 · binds GLN247, TRP249, TRP250, THR259, TYR278, HIS280, TRP314, GLU317 and 3 more
  • 3ZYF · Crystal structure of pa-il lectin complexed with npg at 1.9 a resolution · 147 A1001 · binds TYR36, GLY37, PRO38, HIS50, PRO51, GLN53, CYS62, ASP100 and 3 more
  • 4CCC · Structure of mouse galactocerebrosidase with 4NBDG: enzyme-substrate complex · 147 A1001 · binds GLY48, THR92, THR93, TRP135, ASN181, GLU182, TYR238, GLU258 and 6 more
  • 4R6R · Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity. · 147 A201 · binds GLY1, PHE47, TYR78, VAL80, GLY121, TYR122, TRP123, ASP125
  • 1JYW · E. COLI (lacz) beta-galactosidase (E537Q) in complex with pnpg · 147 A2001 · binds ASN102, VAL103, ASP201, HIS418, GLU461, MET502, TYR503, GLN537 and 6 more
  • 1KRV · Galactoside acetyltransferase in complex with CoA and pnp-beta-gal · 147 A206 · binds ASP17, ARG26, SER71, TYR72, VAL91, ASP93, THR113, HIS115 and 7 more
  • 2WGZ · Crystal structure of alpha-1,3 galactosyltransferase (ALPHA3GT) in a complex with… · 147 A1204 · binds GLN247, TRP249, TRP250, THR259, TYR278, HIS280, TRP314, GLU317 and 3 more
  • 3ZYF · Crystal structure of pa-il lectin complexed with npg at 1.9 a resolution · 147 A1001 · binds TYR36, GLY37, PRO38, HIS50, PRO51, GLN53, CYS62, ASP100 and 3 more
  • 4CCC · Structure of mouse galactocerebrosidase with 4NBDG: enzyme-substrate complex · 147 A1001 · binds GLY48, THR92, THR93, TRP135, ASN181, GLU182, TYR238, GLU258 and 6 more
  • 4R6R · Jacalin-carbohydrate interactions. distortion of the ligand as a determinant of affinity. · 147 A201 · binds GLY1, PHE47, TYR78, VAL80, GLY121, TYR122, TRP123, ASP125

Residues it binds most

TYR 32, ASN 24, TRP 18, VAL 28, ASP 28, HIS 24, GLY 18, THR 18, GLN 18, GLU 12 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • COA · Coenzyme A
  • NPO · P-nitrophenol
  • UDP · Uridine-5'-diphosphate
  • MG · Magnesium ion
  • MN · Manganese (II) ion
  • NA · Sodium ion
  • GAL · beta-D-galactopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • DMS · Dimethyl sulfoxide
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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