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Ligand · 06O

06O · [(2~{R})-1-hexadecanoyloxy-3-[[(1~{S},2~{R},3~{R}, 4~{S},5~{S},6~{R})-2-hexadecanoyloxy-3,4,5,6-tetrakis(oxidanyl)cyclohexyl]oxy-oxidanyl-phosphoryl]oxy-propan-2-yl] (9~{Z},11~{Z})-octadeca-9, 11-dienoate

06O, [(2~{R})-1-hexadecanoyloxy-3-[[(1~{S},2~{R},3~{R}, 4~{S},5~{S},6~{R})-2-hexadecanoyloxy-3,4,5,6-tetrakis(oxidanyl)cyclohexyl]oxy-oxidanyl-phosphoryl]oxy-propan-2-yl] (9~{Z},11~{Z})-octadeca-9, 11-dienoate (C59 H109 O14 P, 1073.5…

Component
06O
Formula
C59 H109 O14 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

06O in 2 structures; the first of them:

  • 7WLD · Cryo-EM structure of the human glycosylphosphatidylinositol transamidase complex at 2.53… · 06O U809 · binds ASP521, SER523, MET524, LEU531, ILE361, VAL364, CYS365, LEU372 and 8 more
  • 7WLD · Cryo-EM structure of the human glycosylphosphatidylinositol transamidase complex at 2.53… · 06O U809 · binds ASP521, SER523, ILE361, ASN383, ASN385, PHE386, ALA389, ILE390 and 2 more

Residues it binds most

ASN 2, ILE 2, LEU 2, ALA 2, ASP 2, PHE 2, SER 2, THR 2, VAL 1, CYS 1 (residue and the binding sites it lines).

Found with

  • 05E · 2-azanylethyl [(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate
  • AJP · Digitonin
  • BJR · (4S,7R)-7-[(hexadecanoyloxy)methyl]-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-3,5,8-trioxa-4lambda~5~-phosphahexacosan-1-aminium
  • CDL · Cardiolipin
  • CLR · Cholesterol
  • DKB · [(2R)-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] octadecanoate
  • P5S · O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy) propyl]oxy}(hydroxy)phosphoryl]-L-serine
  • PA1 · 2-amino-2-deoxy-alpha-D-glucopyranose
  • PEE · 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
  • Y01 · Cholesterol hemisuccinate
  • CA · Calcium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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