Ligand · 06O
06O · [(2~{R})-1-hexadecanoyloxy-3-[[(1~{S},2~{R},3~{R}, 4~{S},5~{S},6~{R})-2-hexadecanoyloxy-3,4,5,6-tetrakis(oxidanyl)cyclohexyl]oxy-oxidanyl-phosphoryl]oxy-propan-2-yl] (9~{Z},11~{Z})-octadeca-9, 11-dienoate
06O, [(2~{R})-1-hexadecanoyloxy-3-[[(1~{S},2~{R},3~{R}, 4~{S},5~{S},6~{R})-2-hexadecanoyloxy-3,4,5,6-tetrakis(oxidanyl)cyclohexyl]oxy-oxidanyl-phosphoryl]oxy-propan-2-yl] (9~{Z},11~{Z})-octadeca-9, 11-dienoate (C59 H109 O14 P, 1073.5…
- Component
- 06O
- Formula
- C59 H109 O14 P
- Class
- ligand
- Structures
- 2
- PDB entries
- 1
Binding sites
06O in 2 structures; the first of them:
- 7WLD · Cryo-EM structure of the human glycosylphosphatidylinositol transamidase complex at 2.53… · 06O U809 · binds ASP521, SER523, MET524, LEU531, ILE361, VAL364, CYS365, LEU372 and 8 more
- 7WLD · Cryo-EM structure of the human glycosylphosphatidylinositol transamidase complex at 2.53… · 06O U809 · binds ASP521, SER523, ILE361, ASN383, ASN385, PHE386, ALA389, ILE390 and 2 more
Residues it binds most
ASN 2, ILE 2, LEU 2, ALA 2, ASP 2, PHE 2, SER 2, THR 2, VAL 1, CYS 1 (residue and the binding sites it lines).
Found with
- 05E · 2-azanylethyl [(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate
- AJP · Digitonin
- BJR · (4S,7R)-7-[(hexadecanoyloxy)methyl]-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-3,5,8-trioxa-4lambda~5~-phosphahexacosan-1-aminium
- CDL · Cardiolipin
- CLR · Cholesterol
- DKB · [(2R)-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] octadecanoate
- P5S · O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy) propyl]oxy}(hydroxy)phosphoryl]-L-serine
- PA1 · 2-amino-2-deoxy-alpha-D-glucopyranose
- PEE · 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
- Y01 · Cholesterol hemisuccinate
- CA · Calcium ion
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
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