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MolNFT v2 · #37309 · protein

Second Ca2+ binding domain of the Na,Ca-exchanger (NCX1)

2FWU · Sodium/calcium exchanger 1: “Second Ca2+ binding domain of the Na,Ca-exchanger (NCX1)”. Solution nmr at NOT, 1 ligand (CA), 1 pocket (best druggability 0.41). MolNFT v2 #37309 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
2FWU
Type
protein
Length
157 residues
Chains
1
Method
solution nmr
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
NOT
Source
Canis lupus familiaris
Molecule
Sodium/calcium exchanger 1
UniProt
P23685
Ligands
CA
Pockets
1 · best druggability 0.41

Structure

solution nmr · resolution NOT · 1 distinct chain · 4% helix, 32% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASodium/calcium exchanger 1protein1574% helix, 32% strandP23685

Ligands and binding sites

  • CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11520.410.7418empty

Compared structures

  • 2FWU · Second CA2+ binding domain of the NA,CA-exchanger (NCX1) · the same entry in another collection · chain A against A, TM-score 1.00
  • P23685 · AlphaFold monomer V2.0 prediction for SODIUM/CALCIUM exchanger 1 (P23685) · a predicted model of the same protein · chain A against A, TM-score 0.72

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