MolNFT v2 · #187909 · protein
Plasmodium falciparum kinesin-5 motor domain without nucleotide, complexed with 14 protofilament microtubule.
7NB8: “Plasmodium falciparum kinesin-5 motor domain without nucleotide, complexed with 14 protofilament microtubule.”. Electron microscopy at 4.4, 3 ligands (GTP, G2P, MG). MolNFT v2 #187909 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7NB8
- Type
- protein
- Length
- 1,177 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 4.4
- Source
- Plasmodium falciparum (isolate 3D7); Sus scrofa
- UniProt
- Q2XVP4, P02554, O77382
- Ligands
- GTP, G2P, MG
Structure
electron microscopy · resolution 4.4 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 428 | — | Q2XVP4 |
| B | — | protein | 426 | — | P02554 |
| K | — | protein | 323 | — | O77382 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · chains A, B
- G2P · Phosphomethylphosphonic acid guanylate ester · ligand · chains B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NB8 · Plasmodium falciparum kinesin-5 motor domain without nucleotide, complexed with 14… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2XVP4
- Every structure of UniProt P02554
- Every structure of UniProt O77382
- Elsewhere: RCSB PDB 7NB8 · PDBe 7NB8 · UniProt Q2XVP4 · UniProt P02554 · UniProt O77382
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