MolNFT v2 · #154217 · protein
Complex of GGTaseIII and full-length Ykt6
6J74: “Complex of GGTaseIII and full-length Ykt6”. X-ray diffraction at 3.212, 2 ligands (ZN, PO4). MolNFT v2 #154217 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6J74
- Type
- protein
- Length
- 796 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.212
- Source
- Homo sapiens
- UniProt
- Q7Z6K3, P53611, O15498
- Ligands
- ZN, PO4
Structure
x-ray diffraction · resolution 3.212 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 276 | — | Q7Z6K3 |
| B | — | protein | 328 | — | P53611 |
| C | — | protein | 192 | — | O15498 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6J74 · Complex of ggtaseiii and full-length YKT6 · the same entry in another collection · chain A against A, TM-score 1.00
- P53611 · AlphaFold monomer V2.0 prediction for geranylgeranyl transferase type-2 subunit beta… · a predicted model of the same protein · chain B against A, TM-score 0.99
- O15498 · AlphaFold monomer V2.0 prediction for synaptobrevin homolog YKT6 (O15498) · a predicted model of the same protein · chain C against A, TM-score 0.98
- Q7Z6K3 · AlphaFold monomer V2.0 prediction for protein prenyltransferase alpha subunit… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7Z6K3
- Every structure of UniProt P53611
- Every structure of UniProt O15498
- Elsewhere: RCSB PDB 6J74 · PDBe 6J74 · UniProt Q7Z6K3 · UniProt P53611 · UniProt O15498
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