GL1X · GenesisL1 explorer

MolNFT v2 · #152112 · protein

Structure of the C-terminal domain of USP25 (748-1048)

6HEM: “Structure of the C-terminal domain of USP25 (748-1048)”. X-ray diffraction at 1.72, 1 ligand (NA). MolNFT v2 #152112 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6HEM
Type
protein
Length
300 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.72
Source
Homo sapiens
UniProt
Q9UHP3
Ligands
NA

Structure

x-ray diffraction · resolution 1.72 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein300—Q9UHP3

Ligands and binding sites

  • NA · Sodium ion · metal · chains A
  • GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6HEM · Structure of the C-terminal domain of USP25 (748-1048) · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9UHP3 · AlphaFold monomer V2.0 prediction for ubiquitin carboxyl-terminal hydrolase 25 (Q9UHP3) · a predicted model of the same protein · chain A against A, TM-score 0.96

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