MolNFT v2 · #151868 · protein
ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST SALBUTAMOL AND NANOBODY Nb6B9
6H7M: “ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST SALBUTAMOL AND NANOBODY Nb6B9”. X-ray diffraction at 2.76, 3 ligands (2CV, 68H, NA). MolNFT v2 #151868 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H7M
- Type
- protein
- Length
- 1,030 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.76
- Source
- Escherichia coli (strain K12); Lama glama; Meleagris gallopavo
- UniProt
- P0AA25, P07700
- Ligands
- 2CV, 68H, NA
Structure
x-ray diffraction · resolution 2.76 · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E | — | protein | 107 | — | P0AA25 |
| A | — | protein | 291 | — | P07700 |
| C, D | — | protein | 120 | — | — |
| F | — | protein | 107 | — | P0AA25 |
| B | — | protein | 285 | — | P07700 |
Ligands and binding sites
- 2CV · Hega-10 · ligand · 7 copies · chains A, B
- 68H · Salbutamol · ligand · 2 copies · chains A, B
- NA · Sodium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H7M · Activated turkey BETA1 adrenoceptor with bound partial agonist salbutamol and nanobody… · the same entry in another collection · chain F against F, TM-score 1.00
- P0AA25 · AlphaFold monomer V2.0 prediction for thioredoxin 1 (P0AA25) · a predicted model of the same protein · chain F against A, TM-score 0.97
- P07700 · AlphaFold monomer V2.0 prediction for beta-1 adrenergic receptor (P07700) · a predicted model of the same protein · chain B against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AA25
- Every structure of UniProt P07700
- Elsewhere: RCSB PDB 6H7M · PDBe 6H7M · UniProt P0AA25 · UniProt P07700
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