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MolNFT v2 · #151536 · protein

Crystal structure of the human RPAP3(TPR2)-PIH1D1(CS) complex

6GXZ: “Crystal structure of the human RPAP3(TPR2)-PIH1D1(CS) complex”. X-ray diffraction at 2.965, 1 ligand (CA). MolNFT v2 #151536 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6GXZ
Type
protein
Length
479 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.965
Source
Homo sapiens
UniProt
Q9H6T3, Q9NWS0
Ligands
CA

Structure

x-ray diffraction · resolution 2.965 · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein149—Q9H6T3
C—protein156—Q9H6T3
D—protein88—Q9NWS0
E—protein86—Q9NWS0

Ligands and binding sites

  • CA · Calcium ion · metal · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6GXZ · Crystal structure of the human RPAP3(TPR2)-PIH1D1(CS) complex · the same entry in another collection · chain E against E, TM-score 1.00
  • Q9NWS0 · AlphaFold monomer V2.0 prediction for PIH1 domain-containing protein 1 (Q9NWS0) · a predicted model of the same protein · chain E against A, TM-score 0.97
  • Q9H6T3 · AlphaFold monomer V2.0 prediction for RNA polymerase II-associated protein 3 (Q9H6T3) · a predicted model of the same protein · chain A against A, TM-score 0.86

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