MolNFT v2 · #151212 · protein
KRAS-169 Q61H gppnhp + ppin-1
6GOM: “KRAS-169 Q61H gppnhp + ppin-1”. X-ray diffraction at 1.63, 4 ligands (GNP, F6E, MG). MolNFT v2 #151212 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GOM
- Type
- protein
- Length
- 984 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.63
- Source
- Homo sapiens
- UniProt
- P01116
- Ligands
- GNP, F6E, MG, PO4
Structure
x-ray diffraction · resolution 1.63 · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 171 | — | P01116 |
| B | — | protein | 169 | — | P01116 |
| C | — | protein | 160 | — | P01116 |
| D | — | protein | 161 | — | P01116 |
| E | — | protein | 163 | — | P01116 |
| F | — | protein | 160 | — | P01116 |
Ligands and binding sites
- GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · 6 copies · chains A, B, C, D, E, F
- F6E · (6~{S})-1-(1~{H}-imidazol-4-ylcarbonyl)-6-[(4-phenylphenyl)methyl]-4-propyl-1,4-diazepan-5-one · ligand · chains A, C
- MG · Magnesium ion · metal · 6 copies · chains A, B, C, D, E, F
- PO4 · Phosphate ion · ion · chains A, B, D
- CIT · Citric acid · additive · 3 copies · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01116
- Elsewhere: RCSB PDB 6GOM · PDBe 6GOM · UniProt P01116
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