MolNFT v2 · #122493 · protein
Macrolide 2'-phosphotransferase type II - complex with GDP and phosphorylated josamycin
5IH1: “Macrolide 2'-phosphotransferase type II - complex with GDP and phosphorylated josamycin”. X-ray diffraction at 1.31, 4 ligands (GDP, 6BQ, MG). MolNFT v2 #122493 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5IH1
- Type
- protein
- Length
- 297 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.31
- Source
- Escherichia coli
- UniProt
- O32553
- Ligands
- GDP, 6BQ, MG, CA
Structure
x-ray diffraction · resolution 1.31 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 297 | — | O32553 |
Ligands and binding sites
- GDP · Guanosine-5'-diphosphate · ligand · chains A
- 6BQ · Phosphorylated josamycin · ligand · chains A
- MG · Magnesium ion · metal · chains A
- CA · Calcium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5IH1 · Macrolide 2'-phosphotransferase type II - complex with GDP and phosphorylated josamycin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O32553
- Elsewhere: RCSB PDB 5IH1 · PDBe 5IH1 · UniProt O32553
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