MolNFT v2 · #113488 · protein + RNA
Human eRF1 and the hCMV nascent peptide in the translation termination complex
5A8L: “Human eRF1 and the hCMV nascent peptide in the translation termination complex”. Electron microscopy at 3.8. MolNFT v2 #113488 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5A8L
- Type
- protein + RNA
- Length
- 971 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.8
- Source
- HOMO SAPIENS
- UniProt
- P18621, P30050, P36578, P62495
Structure
electron microscopy · resolution 3.8 · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 253 | — | — |
| B | — | rna | 67 | — | — |
| D | — | protein | 21 | — | P18621 |
| G | — | protein | 138 | — | P30050 |
| H | — | protein | 12 | — | P36578 |
| P | — | rna | 18 | — | — |
| Q | — | protein | 431 | — | P62495 |
| R | — | rna | 9 | — | — |
| Z | — | protein | 22 | — | — |
Compared structures
- 5A8L · Human ERF1 and the hcmv nascent peptide in the translation termination complex · the same entry in another collection · chain Z against Z, TM-score 1.00
- P62495 · AlphaFold monomer V2.0 prediction for eukaryotic peptide chain release factor subunit 1… · a predicted model of the same protein · chain Q against A, TM-score 0.72
- P30050 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L12 (P30050) · a predicted model of the same protein · chain G against A, TM-score 0.70
- P18621 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L17 (P18621) · a predicted model of the same protein · chain D against A, TM-score 0.52
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18621
- Every structure of UniProt P30050
- Every structure of UniProt P36578
- Every structure of UniProt P62495
- Elsewhere: RCSB PDB 5A8L · PDBe 5A8L · UniProt P18621 · UniProt P30050 · UniProt P36578 · UniProt P62495
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