MolNFT v1 · #88374 · protein
High resolution crystal structure of the histone fold dimer (nf-yb)-(nf-yc)
4CSR · Nuclear transcription factor Y subunit beta: “High resolution crystal structure of the histone fold dimer (nf-yb)-(nf-yc)”. X-ray diffraction. MolNFT v1 #88374 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4CSR
- Type
- protein
- Length
- 170 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nuclear transcription factor Y subunit beta; Nuclear transcription factor Y subunit gamma
- UniProt
- P25208, Q13952
Structure
x-ray diffraction · 2 distinct chains · 68% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear transcription factor Y subunit beta | protein | 88 | 72% helix, 3% strand | P25208 |
| B | Nuclear transcription factor Y subunit gamma | protein | 82 | 65% helix, 4% strand | Q13952 |
Ligands and binding sites
- GOL · Glycerol · additive · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 2424 Ų buried · 23 hydrogen bonds · protein-protein
Compared structures
- 4CSR · High resolution crystal structure of the histone fold dimer (NF-YB)-(NF-YC) · the same entry in another collection · chain A against A, TM-score 1.00
- P25208 · AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit beta (P25208) · a predicted model of the same protein · chain A against A, TM-score 0.93
- Q13952 · AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit gamma… · a predicted model of the same protein · chain B against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25208
- Every structure of UniProt Q13952
- Elsewhere: RCSB PDB 4CSR · PDBe 4CSR · UniProt P25208 · UniProt Q13952
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