UniProt Q13952
Nuclear transcription factor Y subunit gamma (Q13952)
Nuclear transcription factor Y subunit gamma (UniProt Q13952): 15 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 8 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q13952
- Protein
- Nuclear transcription factor Y subunit gamma
- Experimental structures
- 15
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 8 · 1 record with a druggable one
Structures
16 records of Q13952 in the MolNFT archive: 15 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1N1J | Crystal structure of the NF-YB/NF-YC histone pair | x-ray diffraction | B | — | — |
| 1N1J | Crystal structure of the nf-YB/NF-yc histone pair | x-ray diffraction | B | — | — |
| 4AWL | The NF-Y transcription factor is structurally and functionally a sequence specific histone | x-ray diffraction | C | — | — |
| 4AWL | The nf-Y transcription factor is structurally and functionally a sequence specific histone | x-ray diffraction | C | — | — |
| 4CSR | High resolution crystal structure of the histone fold dimer (NF-YB)-(NF-YC) | x-ray diffraction | B | — | — |
| 4CSR | High resolution crystal structure of the histone fold dimer (nf-yb)-(nf-yc) | x-ray diffraction | B | — | — |
| 6QMP | Nf-YB/C heterodimer in complex with nf-ya peptide | x-ray diffraction | C | — | — |
| 6QMQ | NF-YB/C Heterodimer in Complex with NF-YA-derived Peptide Stabilized with C8-Hydrocarbon Linker | x-ray diffraction | C | NA | 1 (best 0.40) |
| 6QMQ | Nf-YB/C heterodimer in complex with nf-ya-derived peptide stabilized with C8-hydrocarbon linker | x-ray diffraction | C | ACE, NA | — |
| 6QMS | Nf-YB/C heterodimer in complex with nf-ya-derived peptide stabilized with C11-hydrocarbon linker | x-ray diffraction | C | — | — |
| 7AH8 | NF-Y bound to suramin inhibitor | x-ray diffraction | B, D | SVR | 1 (best 0.69) |
| 7AH8 | Nf-Y bound to suramin inhibitor | x-ray diffraction | B, D | SVR | — |
| 8QU2 | NF-YB/C Heterodimer in Complex with a 16-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon… | x-ray diffraction | C | — | 2 (best 0.33) |
| 8QU3 | NF-YB/C Heterodimer in Complex with a 13-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon… | x-ray diffraction | C | — | 1 (best 0.29) |
| 8QU4 | NF-YB/C Heterodimer in Complex with a 13-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon… | x-ray diffraction | C | — | 1 (best 0.41) |
| Q13952 | AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit gamma (Q13952) | predicted | A | — | 2 (best 0.32) |
Ligands
Experiment against prediction
- 7AH8 chain B against the predicted model Q13952: TM-score 0.97, RMSD 0.63 Å
- 7AH8 chain B against the predicted model Q13952: TM-score 0.97, RMSD 0.63 Å
- 4AWL chain C against the predicted model Q13952: TM-score 0.96, RMSD 0.89 Å
- 4AWL chain C against the predicted model Q13952: TM-score 0.96, RMSD 0.89 Å
- 6QMP chain C against the predicted model Q13952: TM-score 0.96, RMSD 0.67 Å
- 6QMS chain C against the predicted model Q13952: TM-score 0.95, RMSD 0.96 Å
- 7AH8 chain D against the predicted model Q13952: TM-score 0.95, RMSD 0.77 Å
- 7AH8 chain D against the predicted model Q13952: TM-score 0.95, RMSD 0.77 Å
- 8QU2 chain C against the predicted model Q13952: TM-score 0.95, RMSD 1.26 Å
- 1N1J chain B against the predicted model Q13952: TM-score 0.94, RMSD 0.86 Å
Elsewhere
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