GL1X · GenesisL1 explorer

MolNFT v1 · #161708 · protein

Nf-YB/C heterodimer in complex with nf-ya-derived peptide stabilized with C8-hydrocarbon linker

6QMQ: “Nf-YB/C heterodimer in complex with nf-ya-derived peptide stabilized with C8-hydrocarbon linker”. X-ray diffraction, 2 ligands (ACE, NA). MolNFT v1 #161708 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6QMQ
Type
protein
Length
189 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P23511, P25208, Q13952
Ligands
ACE, NA

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein18—P23511
B—protein87—P25208
C—protein84—Q13952

Ligands and binding sites

  • ACE · Acetyl group · ligand · chains A, C
  • NA · Sodium ion · metal · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6QMQ · NF-YB/C Heterodimer in Complex with NF-YA-derived Peptide Stabilized with C8-Hydrocarbon… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q13952 · AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit gamma… · a predicted model of the same protein · chain C against A, TM-score 0.92
  • P25208 · AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit beta (P25208) · a predicted model of the same protein · chain B against A, TM-score 0.90
  • P23511 · AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit alpha… · a predicted model of the same protein · chain A against A, TM-score 0.75

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.