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MolNFT v1 · #70373 · protein

Human MMP12 in complex with non-zinc chelating inhibitor

3LIL · Macrophage metalloelastase: “Human MMP12 in complex with non-zinc chelating inhibitor”. X-ray diffraction, 4 ligands (EEA, HAE, CA), 1 pocket (best druggability 0.52). MolNFT v1 #70373 on GenesisL1: 3D structure, binding sites and…

PDB
3LIL
Type
protein
Length
159 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Macrophage metalloelastase
EC
3.4.24.65
UniProt
P39900
Ligands
EEA, HAE, CA, ZN
Pockets
1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 25% helix, 17% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AMacrophage metalloelastase (EC 3.4.24.65)protein15925% helix, 17% strandP39900

Ligands and binding sites

  • EEA · N-{3-[3-(3'-chlorobiphenyl-4-yl)isoxazol-5-yl]propanoyl}-L-alpha-glutamyl-L-alpha-glutamyl-amide · ligand · chains A
  • HAE · Acetohydroxamic acid · ligand · chains A
  • CA · Calcium ion · metal · 3 copies · chains A
  • ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11430.520.8026EEA, HAE

Compared structures

  • 3LIL · Human MMP12 in complex with non-zinc chelating inhibitor · the same entry in another collection · chain A against A, TM-score 1.00

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