MolNFT v1 · #19468 · protein
Factor xa specific inhibitor in complex with bovine trypsin
1QL8: “Factor xa specific inhibitor in complex with bovine trypsin”. X-ray diffraction, 3 ligands (ZEN, CA, SO4). MolNFT v1 #19468 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1QL8
- Type
- protein
- Length
- 223 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Trypsin
- EC
- 3.4.21.4
- UniProt
- P00760
- Ligands
- ZEN, CA, SO4
Structure
x-ray diffraction · 1 distinct chain · 10% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trypsin (EC 3.4.21.4) | protein | 223 | 10% helix, 36% strand | P00760 |
Ligands and binding sites
- ZEN · [4-(6-chloro-naphthalene-2-sulfonyl)-piperazin-1-yl]- (3,4,5,6-tetrahydro-2H-[1,4']bipyridinyl-4-yl)- methanone · ligand · chains A
- CA · Calcium ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 1QL8 · Factor xa specific inhibitor in complex with bovine trypsin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00760
- Elsewhere: RCSB PDB 1QL8 · PDBe 1QL8 · UniProt P00760
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