MolNFT v1 · #190600 · protein
Cryo-EM structure of pseudomonas aeruginosa rnap sigmas holoenzyme complexes with transcription factor suta (closed lobe)
7XL4: “Cryo-EM structure of pseudomonas aeruginosa rnap sigmas holoenzyme complexes with transcription factor suta…”. Electron microscopy, 2 ligands (ZN, MG). MolNFT v1 #190600 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7XL4
- Type
- protein
- Length
- 3,479 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O52760, Q51561, Q9HWC9, Q9HTM1, Q9HTR9, P45684
- Ligands
- ZN, MG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 225 | — | O52760 |
| B | — | protein | 212 | — | O52760 |
| C | — | protein | 1324 | — | Q51561 |
| D | — | protein | 1339 | — | Q9HWC9 |
| E | — | protein | 70 | — | Q9HTM1 |
| G | — | protein | 31 | — | Q9HTR9 |
| F | — | protein | 278 | — | P45684 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7XL4 · Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with… · the same entry in another collection · chain F against F, TM-score 1.00
- Q51561 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q51561) · a predicted model of the same protein · chain C against A, TM-score 0.95
- Q9HWC9 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9HWC9) · a predicted model of the same protein · chain D against A, TM-score 0.92
- O52760 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (O52760) · a predicted model of the same protein · chain A against A, TM-score 0.90
- P45684 · AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpos (P45684) · a predicted model of the same protein · chain F against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O52760
- Every structure of UniProt Q51561
- Every structure of UniProt Q9HWC9
- Every structure of UniProt Q9HTM1
- Every structure of UniProt Q9HTR9
- Every structure of UniProt P45684
- Elsewhere: RCSB PDB 7XL4 · PDBe 7XL4 · UniProt O52760 · UniProt Q51561 · UniProt Q9HWC9 · UniProt Q9HTM1 · UniProt Q9HTR9 · UniProt P45684
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