MolNFT v1 · #190048 · protein
Structure of the lactoperoxidase with bound nitric oxide and nitrite in the substrate binding site at 1.98 a resolution.
7WCS: “Structure of the lactoperoxidase with bound nitric oxide and nitrite in the substrate binding site at 1.98 a…”. X-ray diffraction, 10 ligands (OSM, HEM, NAG). MolNFT v1 #190048 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 7WCS
- Type
- protein
- Length
- 595 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A452E9Y6
- Ligands
- OSM, HEM, NAG, NA, CA, IOD, NO3, SCN, NO, NO2
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 595 | — | A0A452E9Y6 |
Ligands and binding sites
- OSM · 1-(oxidosulfanyl)methanamine · ligand · 2 copies · chains A
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A
- NA · Sodium ion · metal · 3 copies · chains A
- CA · Calcium ion · metal · chains A
- IOD · Iodide ion · ion · 10 copies · chains A
- NO3 · Nitrate ion · ion · 9 copies · chains A
- SCN · Thiocyanate ion · ion · 4 copies · chains A
- NO · Nitric oxide · ion · chains A
- NO2 · Nitrite ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A452E9Y6
- Elsewhere: RCSB PDB 7WCS · PDBe 7WCS · UniProt A0A452E9Y6
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