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MolNFT v1 · #188629 · protein

Crystal structure of arabidopsis thaliana acetohydroxyacid synthase P197T mutant in complex with chlorimuron-ethyl

7U1D · Acetolactate synthase, chloroplastic: “Crystal structure of arabidopsis thaliana acetohydroxyacid synthase P197T mutant in complex with…”. X-ray diffraction, 6 ligands (FAD, CIE, F50), 4 pockets (best druggability 0.80). MolNFT v1…

PDB
7U1D
Type
protein
Length
582 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Acetolactate synthase, chloroplastic
EC
2.2.1.6
UniProt
P17597
Ligands
FAD, CIE, F50, TP9, MG, SO4
Pockets
4 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 16% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AAcetolactate synthase, chloroplastic (EC 2.2.1.6)protein58241% helix, 16% strandP17597

Ligands and binding sites

  • FAD · Flavin-adenine dinucleotide · ligand · chains A
  • CIE · 2-[[[[(4-chloro-6-methoxy-2-pyrimidinyl) amino]carbonyl]amino]sulfonyl]benzoic acid ethyl ester · ligand · chains A
  • F50 · Ethaneperoxoic acid · ligand · chains A
  • TP9 · (3Z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate · ligand · chains A
  • MG · Magnesium ion · metal · 3 copies · chains A
  • SO4 · Sulfate ion · ion · 2 copies · chains A
  • NHE · 2-[N-cyclohexylamino]ethane sulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
16200.800.8583MG, FAD, F50, TP9, SO4
2560.370.8017empty
31040.360.7418empty
4600.290.7417empty

Modifications

Observed in the structure: 1 modified (oxidation).

Compared structures

  • 7U1D · Crystal structure of arabidopsis thaliana acetohydroxyacid synthase P197T mutant in… · the same entry in another collection · chain A against A, TM-score 1.00
  • P17597 · AlphaFold monomer V2.0 prediction for acetolactate synthase, chloroplastic (P17597) · a predicted model of the same protein · chain A against A, TM-score 1.00

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