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Ligand · TP9

TP9 · (3Z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate

TP9, (3Z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate (C11 H18 N4 O7 P2 S -2, 412.3 g/mol), in the MolNFT structures on GenesisL1: bound in 21 records (12 PDB entries). Every binding…

Component
TP9
Formula
C11 H18 N4 O7 P2 S -2
Class
ligand
Structures
21
PDB entries
12

Binding sites

TP9 in 21 structures; the first of them:

  • 5K2O · Crystal structure of Arabidopsis thaliana acetohydroxyacid synthase in complex with a… · TP9 A705 · binds VAL485, GLY486, GLN487, HIS488, GLY511, ALA512, MET513, GLY537 and 11 more
  • 5K3S · Crystal structure of Arabidopsis thaliana acetohydroxyacid synthase in complex with a… · TP9 A704 · binds VAL485, GLY486, GLN487, HIS488, GLY511, MET513, GLY537, ASP538 and 9 more
  • 5WJ1 · Crystal structure of Arabidopsis thaliana acetohydroxyacid synthase in complex with a… · TP9 A706 · binds VAL485, GLY486, GLN487, HIS488, GLY511, MET513, GLY537, ASP538 and 9 more
  • 5WKC · Saccharomyces cerevisiae acetohydroxyacid synthase in complex with the herbicide… · TP9 B704 · binds VAL497, GLY498, GLN499, HIS500, GLY523, THR524, MET525, GLY549 and 19 more
  • 6DEM · Crystal structure of Candida albicans acetohydroxyacid synthase in complex with the… · TP9 A704 · binds VAL493, GLY494, GLN495, HIS496, GLY519, THR520, MET521, GLY545 and 10 more
  • 6DEN · Crystal structure of Candida albicans acetohydroxyacid synthase in complex with the… · TP9 A705 · binds VAL493, GLY494, GLN495, HIS496, GLY519, THR520, MET521, GLY545 and 10 more
  • 6DEO · Crystal structure of Candida albicans acetohydroxyacid synthase in complex with the… · TP9 A704 · binds VAL493, GLY494, GLN495, HIS496, GLY519, THR520, MET521, GLY545 and 10 more
  • 6DEP · Crystal structure of Candida albicans acetohydroxyacid synthase in complex with the… · TP9 A706 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 6DEQ · Crystal structure of Candida albicans acetohydroxyacid synthase in complex with the… · TP9 A705 · binds VAL493, GLY494, GLN495, HIS496, GLY519, THR520, MET521, GLY545 and 10 more
  • 5K2O · Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a… · TP9 A705 · binds VAL485, GLY486, GLN487, HIS488, GLY511, MET513, GLY537, ASP538 and 9 more
  • 5K3S · Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a… · TP9 A704 · binds VAL485, GLY486, GLN487, HIS488, GLY511, MET513, GLY537, ASP538 and 9 more
  • 5WJ1 · Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a… · TP9 A706 · binds VAL485, GLY486, GLN487, HIS488, GLY511, MET513, GLY537, ASP538 and 9 more
  • 5WKC · Saccharomyces cerevisiae acetohydroxyacid synthase in complex with the herbicide… · TP9 B704 · binds VAL497, GLY498, GLN499, HIS500, GLY523, MET525, GLY549, ASP550 and 17 more
  • 6DEL · Crystal structure of candida albicans acetohydroxyacid synthase in complex with the… · TP9 A705 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 6DEM · Crystal structure of candida albicans acetohydroxyacid synthase in complex with the… · TP9 A704 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 6DEN · Crystal structure of candida albicans acetohydroxyacid synthase in complex with the… · TP9 A705 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 6DEO · Crystal structure of candida albicans acetohydroxyacid synthase in complex with the… · TP9 A704 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 6DEP · Crystal structure of candida albicans acetohydroxyacid synthase in complex with the… · TP9 A706 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 6DEQ · Crystal structure of candida albicans acetohydroxyacid synthase in complex with the… · TP9 A705 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 6DER · Crystal structure of candida albicans acetohydroxyacid synthase in complex with the… · TP9 A706 · binds VAL493, GLY494, GLN495, HIS496, GLY519, MET521, GLY545, ASP546 and 9 more
  • 7U1D · Crystal structure of arabidopsis thaliana acetohydroxyacid synthase P197T mutant in… · TP9 A706 · binds VAL485, GLY486, GLN487, HIS488, GLY511, MET513, GLY537, ASP538 and 9 more

Residues it binds most

GLY 25, MET 25, VAL 25, GLN 25, HIS 25, ASN 25, ASP 25, SER 25, GLU 18, ALA 19 (residue and the binding sites it lines).

Found with

  • FAD · Flavin-adenine dinucleotide
  • MG · Magnesium ion
  • K · Potassium ion
  • PXD · 2-(2,2-difluoroethoxy)-N-(5,8-dimethoxy[1,2, 4]triazolo[1,5-c]pyrimidin-2-yl)-6-(trifluoromethyl) benzenesulfonamide
  • F50 · Ethaneperoxoic acid
  • CO2 · Carbon dioxide
  • TZD · 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogen diphosphate
  • 1SM · Methyl 2-[({[(4,6-dimethylpyrimidin-2-yl) amino]carbonyl}amino)sulfonyl]benzoate
  • 60G · methyl 2-[(4,6-dimethoxypyrimidin-2-yl)carbamoylsulfamoylmethyl]benzoate
  • 6QK · 2-chloranyl-6-(4,6-dimethoxypyrimidin-2-yl)sulfanyl-benzoic acid
  • 6QL · 2,6-bis[(4,6-dimethoxypyrimidin-2-yl)oxy]benzoic acid
  • AUJ · 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1, 3-thiazol-5-yl]ethyl phosphono hydrogen phosphate

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