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MolNFT v1 · #188399 · protein

Single-particle cryo-EM structure of ARP2/3 complex at branched-actin junction.

7TPT: “Single-particle cryo-EM structure of ARP2/3 complex at branched-actin junction.”. Electron microscopy, 2 ligands (ADP, MG). MolNFT v1 #188399 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7TPT
Type
protein
Length
7,232 residues
Chains
36
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P61157, A7MB62, Q58CQ2, Q3MHR7, Q3T035, Q148J6, Q3SYX9, P68135
Ligands
ADP, MG

Structure

electron microscopy · 10 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein414—P61157
B—protein385—A7MB62
C—protein363—Q58CQ2
D—protein283—Q3MHR7
E—protein173—Q3T035
F—protein168—Q148J6
G—protein134—Q3SYX9
H—protein371—P68135
I, J, K, L, M, N, O, P, Q, R, S, T, U—protein372—P68135
a, b, c, d, e, f, g, h, i, j, k, l, m, n, o—protein7——

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · 16 copies · chains A, B, H, I, J, K, L, M, N, O, P, Q, R, S, T, U
  • MG · Magnesium ion · metal · 16 copies · chains A, B, H, I, J, K, L, N, O, P, Q, R, S, U

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7TPT · Single-particle Cryo-EM structure of Arp2/3 complex at branched-actin junction. · the same entry in another collection · chain J against J, TM-score 1.00

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