MolNFT v1 · #188001 · protein
Molecular recognition of formylpeptides and diverse agonists by the formylpeptide receptors FPR1 and FPR2
7T6V: “Molecular recognition of formylpeptides and diverse agonists by the formylpeptide receptors FPR1 and FPR2”. Electron microscopy, 1 ligand (PLM). MolNFT v1 #188001 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7T6V
- Type
- protein
- Length
- 1,142 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P25090, P63096, P54311, P63212
- Ligands
- PLM
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| R | — | protein | 298 | — | P25090 |
| A | — | protein | 217 | — | P63096 |
| B | — | protein | 336 | — | P54311 |
| C | — | protein | 54 | — | P63212 |
| E | — | protein | 232 | — | — |
| L | — | protein | 5 | — | — |
Ligands and binding sites
- PLM · Palmitic acid · ligand · chains R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7T6V · Structure of the human FPR2-Gi complex with fMLFII · the same entry in another collection · chain L against L, TM-score 1.00
- P54311 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 1.00
- P25090 · AlphaFold monomer V2.0 prediction for N-formyl peptide receptor 2 (P25090) · a predicted model of the same protein · chain R against A, TM-score 0.92
- P63096 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.81
- P63212 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain C against A, TM-score 0.66
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25090
- Every structure of UniProt P63096
- Every structure of UniProt P54311
- Every structure of UniProt P63212
- Elsewhere: RCSB PDB 7T6V · PDBe 7T6V · UniProt P25090 · UniProt P63096 · UniProt P54311 · UniProt P63212
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