MolNFT v1 · #186538 · protein
Mycobacterial CIII2CIV2 supercomplex, inhibitor free, -lpqe cyt cc open
7RH6: “Mycobacterial CIII2CIV2 supercomplex, inhibitor free, -lpqe cyt cc open”. Electron microscopy, 11 ligands (CDL, MQ9, 9YF). MolNFT v1 #186538 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RH6
- Type
- protein
- Length
- 5,901 residues
- Chains
- 23
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- I7FPH1, I7GD61, A0R049, I7FGS8, I7G2H6, I7GD63, I7FPH7, I7FQK8, A0R1B5, I7GFE1
- Ligands
- CDL, MQ9, 9YF, 9Y0, HEC, HEA, HEM, PLM, 9XX, FES, CU
Structure
electron microscopy · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| O | — | protein | 210 | — | I7FPH1 |
| R, L | — | protein | 552 | — | — |
| M, Y | — | protein | 382 | — | I7GD61 |
| S, X | — | protein | 203 | — | A0R049 |
| E, F | — | protein | 535 | — | I7FGS8 |
| J, P | — | protein | 92 | — | — |
| D, G | — | protein | 216 | — | I7G2H6 |
| Q, K | — | protein | 312 | — | I7GD63 |
| T, Z | — | protein | 139 | — | I7FPH7 |
| U, a | — | protein | 79 | — | I7FQK8 |
| V, b | — | protein | 145 | — | A0R1B5 |
| c | — | protein | 158 | — | I7GFE1 |
| I | — | protein | 223 | — | I7FPH1 |
Ligands and binding sites
- CDL · Cardiolipin · ligand · 16 copies · chains R, F, S, T, E, I, O, L, J, M, P, X, Z, Y
- MQ9 · Menaquinone-9 · ligand · 8 copies · chains O, F, E, M, Y, R, T, L, Z, I
- 9YF · (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1r,2r,3r,4r, 5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate · ligand · 5 copies · chains O, F, T, E, L, J, c, I, Z, Y, M
- 9Y0 · (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate · ligand · 5 copies · chains R, S, T, F, P, E, J, L, K, c, X, Z
- HEC · Heme C · ligand · 4 copies · chains O, K, c, I, Y
- HEA · Heme-A · ligand · 4 copies · chains R, Q, L, K
- HEM · Protoporphyrin IX containing Fe · ligand · 4 copies · chains E, F
- PLM · Palmitic acid · ligand · 3 copies · chains E, J, D, F, G, P, L, c
- 9XX · (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate · ligand · 3 copies · chains E, D, F, G, L, J, c
- FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains M, Y
- CU · Copper (II) ion · metal · 6 copies · chains R, L, Q, K
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RH6 · Mycobacterial CIII2CIV2 supercomplex, inhibitor free, -Lpqe cyt cc open · the same entry in another collection · chain Y against Y, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I7FPH1
- Every structure of UniProt I7GD61
- Every structure of UniProt A0R049
- Every structure of UniProt I7FGS8
- Every structure of UniProt I7G2H6
- Every structure of UniProt I7GD63
- Every structure of UniProt I7FPH7
- Every structure of UniProt I7FQK8
- Every structure of UniProt A0R1B5
- Every structure of UniProt I7GFE1
- Elsewhere: RCSB PDB 7RH6 · PDBe 7RH6 · UniProt I7FPH1 · UniProt I7GD61 · UniProt A0R049 · UniProt I7FGS8 · UniProt I7G2H6 · UniProt I7GD63 · UniProt I7FPH7 · UniProt I7FQK8 · UniProt A0R1B5 · UniProt I7GFE1
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