MolNFT v1 · #185078 · protein
Cryo-EM structure of deptor bound to human mtor complex 1, dept-bound subset local refinement
7PEC: “Cryo-EM structure of deptor bound to human mtor complex 1, dept-bound subset local refinement”. Electron microscopy, 1 ligand (IHP). MolNFT v1 #185078 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PEC
- Type
- protein
- Length
- 3,878 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P42345, Q9BVC4, Q8N122, Q8TB45
- Ligands
- IHP
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 2192 | — | P42345 |
| C | — | protein | 317 | — | Q9BVC4 |
| E | — | protein | 1052 | — | Q8N122 |
| I | — | protein | 317 | — | Q8TB45 |
Ligands and binding sites
- IHP · Inositol hexakisphosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PEC · cryo-EM structure of DEPTOR bound to human mTOR complex 1, DEPt-bound subset local… · the same entry in another collection · chain I against I, TM-score 1.00
- Q8N122 · AlphaFold monomer V2.0 prediction for regulatory-associated protein of mtor (Q8N122) · a predicted model of the same protein · chain E against A, TM-score 0.99
- Q9BVC4 · AlphaFold monomer V2.0 prediction for target of rapamycin complex subunit LST8 (Q9BVC4) · a predicted model of the same protein · chain C against A, TM-score 0.97
- P42345 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase mtor (P42345) · a predicted model of the same protein · chain A against A, TM-score 0.87
- Q8TB45 · AlphaFold monomer V2.0 prediction for dep domain-containing mtor- interacting protein… · a predicted model of the same protein · chain I against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42345
- Every structure of UniProt Q9BVC4
- Every structure of UniProt Q8N122
- Every structure of UniProt Q8TB45
- Elsewhere: RCSB PDB 7PEC · PDBe 7PEC · UniProt P42345 · UniProt Q9BVC4 · UniProt Q8N122 · UniProt Q8TB45
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.