MolNFT v1 · #183641 · protein
Crystal structure of the complex of DNase I/G-ACTIN/PPP1R15A_582-621
7NXV: “Crystal structure of the complex of DNase I/G-ACTIN/PPP1R15A_582-621”. X-ray diffraction, 3 ligands (ATP, NAG, CA). MolNFT v1 #183641 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7NXV
- Type
- protein
- Length
- 1,341 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P68135, P00639, O75807
- Ligands
- ATP, NAG, CA
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 373 | — | P68135 |
| B, F | — | protein | 260 | — | P00639 |
| C | — | protein | 38 | — | O75807 |
| D | — | protein | 371 | — | P68135 |
| E | — | protein | 39 | — | O75807 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 2 copies · chains A, D
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains B, F
- CA · Calcium ion · metal · 6 copies · chains B, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NXV · Crystal structure of the complex of DNase I/G-actin/PPP1R15A_582-621 · the same entry in another collection · chain F against F, TM-score 1.00
- P00639 · AlphaFold monomer V2.0 prediction for deoxyribonuclease-1 (P00639) · a predicted model of the same protein · chain B against A, TM-score 1.00
- P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain D against A, TM-score 0.98
- O75807 · AlphaFold monomer V2.0 prediction for protein phosphatase 1 regulatory subunit 15A… · a predicted model of the same protein · chain C against A, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68135
- Every structure of UniProt P00639
- Every structure of UniProt O75807
- Elsewhere: RCSB PDB 7NXV · PDBe 7NXV · UniProt P68135 · UniProt P00639 · UniProt O75807
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