CD1C with antigen analogue 2

Structure

x-ray diffraction · 2 distinct chains.

Ligands and binding sites

• ZQ4 · 2,6-anhydro-1-deoxy-1-[(S)-hydroxy{[(4r,8s,12r,16r, 20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-D-glycero-D-galacto-heptitol · ligand · chains A
• D12 · Dodecane · ligand · chains A
• ZP7 · (2S)-2,3-dihydroxypropyl hexadecanoate · ligand · chains A
• NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
• NHE · 2-[N-cyclohexylamino]ethane sulfonic acid · additive · chains A, B
• MLA · Malonic acid · additive · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

• 7MXF · CD1c with antigen analogue 2 · the same entry in another collection · chain A against A, TM-score 1.00
• P29017 · AlphaFold monomer V2.0 prediction for T-cell surface glycoprotein CD1C (P29017) · a predicted model of the same protein · chain A against A, TM-score 0.96
• P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.93
• P29016 · AlphaFold monomer V2.0 prediction for T-cell surface glycoprotein CD1B (P29016) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P29017
• Every structure of UniProt P29016
• Every structure of UniProt P61769
• Elsewhere: RCSB PDB 7MXF · PDBe 7MXF · UniProt P29017 · UniProt P29016 · UniProt P61769