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Ligand · ZP7

ZP7 · (2S)-2,3-dihydroxypropyl hexadecanoate

ZP7, (2S)-2,3-dihydroxypropyl hexadecanoate (C19 H38 O4, 330.5 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
ZP7
Formula
C19 H38 O4
Class
ligand
Structures
5
PDB entries
3

Binding sites

ZP7 in 5 structures; the first of them:

  • 7MX4 · CD1c with antigen analogue 1 · ZP7 A304 · binds PHE72, TYR73, GLY76, LEU77, GLU80, ILE81, HIS84, SER139 and 5 more
  • 7MXH · CD1c with antigen analogue 3 · ZP7 A304 · binds PHE72, TYR73, GLY76, LEU77, GLU80, ILE81, HIS84, SER139 and 6 more
  • 7MX4 · CD1C with antigen analogue 1 · ZP7 A304 · binds PHE72, TYR73, LEU77, GLU80, HIS84, SER139, SER143, LEU148 and 1 more
  • 7MXF · CD1C with antigen analogue 2 · ZP7 A305 · binds PHE72, LEU77, GLU80, ILE81, HIS84, SER143, VAL144, LEU148 and 2 more
  • 7MXH · CD1C with antigen analogue 3 · ZP7 A304 · binds PHE72, TYR73, GLY76, LEU77, GLU80, HIS84, LEU140, SER143 and 3 more

Residues it binds most

LEU 5, TYR 5, SER 5, GLU 5, HIS 5, PHE 5, VAL 3, GLY 3, ILE 3 (residue and the binding sites it lines).

Found with

  • D12 · Dodecane
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • MLA · Malonic acid
  • NHE · 2-[N-cyclohexylamino]ethane sulfonic acid
  • ZPD · (4S,8R,12S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl (1R,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl) cyclohexyl hydrogen (R)-phosphate
  • ZQ7 · 2,6-anhydro-1-deoxy-1,1-difluoro-1-[(R)-hydroxy{[(4s, 8S,12S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-D-glycero-D-galacto-heptitol
  • ZQ4 · 2,6-anhydro-1-deoxy-1-[(S)-hydroxy{[(4r,8s,12r,16r, 20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-D-glycero-D-galacto-heptitol

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