GL1X · GenesisL1 explorer

MolNFT v1 · #180505 · protein

Orexin receptor 2 (OX2R) in complex with G protein and small-molecule agonist compound 1

7L1V: “Orexin receptor 2 (OX2R) in complex with G protein and small-molecule agonist compound 1”. Electron microscopy, 1 ligand (XGD). MolNFT v1 #180505 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7L1V
Type
protein
Length
1,253 residues
Chains
6
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P62873, P59768, Q548Y0
Ligands
XGD

Structure

electron microscopy · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein228——
B—protein339—P62873
C—protein58—P59768
H—protein233——
R—protein284—Q548Y0
S—protein111——

Ligands and binding sites

  • XGD · 4'-methoxy-N,N-dimethyl-3'-{[3-(2-{[2-(2H-1,2,3-triazol-2-yl)benzene-1-carbonyl]amino}ethyl) phenyl]sulfamoyl}[1,1'-biphenyl]-3-carboxamide · ligand · chains R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7L1V · Orexin Receptor 2 (OX2R) in Complex with G Protein and Small-Molecule Agonist Compound 1 · the same entry in another collection · chain S against S, TM-score 1.00
  • P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 1.00
  • P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain C against A, TM-score 0.95

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