MolNFT v1 · #178685 · protein
ATP-bound AMP-activated protein kinase
7JIJ: “ATP-bound AMP-activated protein kinase”. X-ray diffraction, 4 ligands (ATP, AMP, ADP). MolNFT v1 #178685 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JIJ
- Type
- protein
- Length
- 1,161 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A6D0N546, Q13131, O43741, P54619
- Ligands
- ATP, AMP, ADP, GLC
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| M | — | protein | 367 | — | A0A6D0N546 |
| A | — | protein | 407 | — | Q13131 |
| B | — | protein | 87 | — | O43741 |
| G | — | protein | 300 | — | P54619 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · chains A, G
- AMP · Adenosine monophosphate · ligand · chains G
- ADP · Adenosine-5'-diphosphate · ligand · chains G
- GLC · alpha-D-glucopyranose · sugar · 2 copies · chains M
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JIJ · ATP-bound AMP-activated protein kinase · the same entry in another collection · chain M against M, TM-score 1.00
- Q13131 · AlphaFold monomer V2.0 prediction for 5'-AMP-activated protein kinase catalytic subunit… · a predicted model of the same protein · chain A against A, TM-score 0.96
- P54619 · AlphaFold monomer V2.0 prediction for 5'-AMP-activated protein kinase subunit gamma-1… · a predicted model of the same protein · chain G against A, TM-score 0.95
- O43741 · AlphaFold monomer V2.0 prediction for 5'-AMP-activated protein kinase subunit beta-2… · a predicted model of the same protein · chain B against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A6D0N546
- Every structure of UniProt Q13131
- Every structure of UniProt O43741
- Every structure of UniProt P54619
- Elsewhere: RCSB PDB 7JIJ · PDBe 7JIJ · UniProt A0A6D0N546 · UniProt Q13131 · UniProt O43741 · UniProt P54619
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