Structure of photosynthetic LH1-rc super-complex of rhodobacter sphaeroides monomer

Structure

electron microscopy · 14 distinct chains.

Ligands and binding sites

• BCL · Bacteriochlorophyll A · ligand · 32 copies · chains L, M, A, B, X, D, E, F, G, I, J, K, N, O, P, Q, R, S, T, V, W, Y, Z, 1, 2, 3, 4, 5, 6, 7, 8
• SPO · Spheroidene · ligand · 27 copies · chains M, S, V, A, B, D, E, F, G, I, J, K, N, O, P, Q, R, T, W, Y, Z, 1, 2, 3, 4, 5, 6, 7, 8, X
• PGV · (1R)-2-{[{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11E)-octadec-11-enoate · ligand · 13 copies · chains L, I, U, M, H, F, S, V, D, K, O, Q, Y, 1, 3, X
• CDL · Cardiolipin · ligand · 4 copies · chains L, M, H, I, K, O, V, Y
• U10 · Ubiquinone-10 · ligand · 3 copies · chains L, M, D
• BPH · Bacteriopheophytin A · ligand · 2 copies · chains L, M
• FE · Fe (III) ion · metal · chains L, M
• LMT · Dodecyl-beta-D-maltoside · additive · 24 copies · chains M, H, U, K, O, Q, L, A, D, B, E, F, I, G, J, S, 1, 2, 4, 3, 5, X
• LDA · Lauryl dimethylamine-N-oxide · additive · 6 copies · chains L, X, M, H, Y, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

• 7F0L · Structure of photosynthetic LH1-rc super-complex of rhodobacter sphaeroides monomer · the same entry in another collection · chain J against J, TM-score 1.00

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q7B300
• Every structure of UniProt P0C0X9
• Every structure of UniProt A0A330HGC2
• Every structure of UniProt A0A3G6WQU3
• Elsewhere: RCSB PDB 7F0L · PDBe 7F0L · UniProt Q7B300 · UniProt P0C0X9 · UniProt A0A330HGC2 · UniProt A0A3G6WQU3