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MolNFT v1 · #177097 · protein

Crystal structure of enl yeats domain T1 mutant in complex with histone H3 acetylation at K27

7E7C · Protein enl: “Crystal structure of enl yeats domain T1 mutant in complex with histone H3 acetylation at K27”. X-ray diffraction, 1 ligand (IOD). MolNFT v1 #177097 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7E7C
Type
protein
Length
152 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Protein enl; Histone H3K27AC(24-27) peptide
UniProt
Q03111
Ligands
IOD

Structure

x-ray diffraction · 2 distinct chains · 8% helix, 49% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AProtein enlprotein1488% helix, 49% strandQ03111
BHistone H3K27AC(24-27) peptideprotein40% helix, 25% strand—

Ligands and binding sites

  • IOD · Iodide ion · ion · 2 copies · chains A
  • EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 375 Ų buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 modified (acetylation).

Compared structures

  • 7E7C · Crystal structure of ENL YEATS domain T1 mutant in complex with histone H3 acetylation at… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q03111 · AlphaFold monomer V2.0 prediction for protein enl (Q03111) · a predicted model of the same protein · chain A against A, TM-score 0.93

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