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Crystal structure of enl yeats domain T1 mutant in complex with histone H3 acetylation at K27

Analyse Crystal structure of enl yeats domain T1 mutant in complex with histone H3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7E7C
Type
protein
Length
152 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Protein enl; Histone H3K27AC(24-27) peptide
UniProt
Q03111
Ligands
IOD

Structure

x-ray diffraction · 2 distinct chains · 8% helix, 49% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AProtein enlprotein1488% helix, 49% strandQ03111
BHistone H3K27AC(24-27) peptideprotein40% helix, 25% strand—

Ligands and binding sites

  • IOD · Iodide ion · ion · 2 copies · chains A
  • EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 375 Ų buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 modified (acetylation).

Compared structures

  • 7E7C · Crystal structure of ENL YEATS domain T1 mutant in complex with histone H3 acetylation at… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q03111 · AlphaFold monomer V2.0 prediction for protein enl (Q03111) · a predicted model of the same protein · chain A against A, TM-score 0.93

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