MolNFT v1 · #176445 · protein
Aj-gmpcpp-mt-non-seam
7DN0: “Aj-gmpcpp-mt-non-seam”. Electron microscopy, 4 ligands (GTP, G2P, TAJ). MolNFT v1 #176445 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DN0
- Type
- protein
- Length
- 2,564 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q2XVP4, P02554
- Ligands
- GTP, G2P, TAJ, MG
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D, A, B, C | — | protein | 428 | — | Q2XVP4 |
| E, F | — | protein | 426 | — | P02554 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · 4 copies · chains D, A, F, B, C, E
- G2P · Phosphomethylphosphonic acid guanylate ester · ligand · 2 copies · chains B, E, F
- TAJ · taccalonolide AJ · ligand · 2 copies · chains E, F
- MG · Magnesium ion · metal · 4 copies · chains D, A, F, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DN0 · AJ-GMPCPP-MT-non-seam · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2XVP4
- Every structure of UniProt P02554
- Elsewhere: RCSB PDB 7DN0 · PDBe 7DN0 · UniProt Q2XVP4 · UniProt P02554
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