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MolNFT v1 · #176018 · protein

Crystal structure of the NA+,K+-ATPase in the E2P state with bound MG2+ (P4(3)2(1)2 symmetry)

7D91: “Crystal structure of the NA+,K+-ATPase in the E2P state with bound MG2+ (P4(3)2(1)2 symmetry)”. X-ray diffraction, 4 ligands (PCW, CLR, NAG). MolNFT v1 #176018 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7D91
Type
protein
Length
1,319 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P05024, P05027, Q58K79
Ligands
PCW, CLR, NAG, MG

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein996—P05024
B—protein291—P05027
G—protein32—Q58K79

Ligands and binding sites

  • PCW · 1,2-dioleoyl-sn-glycero-3-phosphocholine · ligand · 11 copies · chains A, B
  • CLR · Cholesterol · ligand · 2 copies · chains A, B, G
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains B
  • MG · Magnesium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7D91 · Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ (P4(3)2(1)2… · the same entry in another collection · chain A against A, TM-score 1.00
  • P05024 · AlphaFold monomer V2.0 prediction for SODIUM/POTASSIUM-transporting ATPase subunit… · a predicted model of the same protein · chain A against A, TM-score 0.97
  • P05027 · AlphaFold monomer V2.0 prediction for SODIUM/POTASSIUM-transporting ATPase subunit beta-1… · a predicted model of the same protein · chain B against A, TM-score 0.97

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